Resources:
- Visit the Dolan DNA Learning Center’s Bioservers site at http://www.bioservers.org/bioserver/
- Visit the Genetic Science Learning Center (GSLC) Pharmacogenomics site (available at http://learn.genetics.utah.edu/content/pharma/
- Link to the review the Drug Development Today and Tomorrow tutorial from the Genetic Science Learning Center (GSLC) Pharmacogenomics site (available athttp://learn.genetics.utah.edu/content/pharma/
Here are the other patients:
PLTW Cancer Center – Bioinformatics Lab
DNA Sequence Data: partial TPMT gene (840 base pairs) –
acute lymphoblastic leukemia (ALL) patients
Renee
gcgggcggag gcggggcgcg gagaagtggc
ggaggtggaa gcggaggcgt acccgcccct
ggggacgtca
ttggtggcgg aggcaatggc cggcaaccag ctgtaagcga ggcacggaag
acatatgctt
gtgagacaaa ggtgtctctg aaactatgga tggtacaaga acttcacttg
acattgaaga
gtactcggat actgaggtac agaaaaacca agtactaact ctggaagaat
ggcaagacaa
gtgggtgaac ggcaagactg cttttcatca ggaacaagga catcagctat
taaagaagca
tttagatact ttccttaaag gcaagagtgg actgagggta ttttttcctc
tttgcggaaa
agcggttgag atgaaatggt ttgcagaccg gggacacagt gtagttggtg
tggaaatcag
tgaacttggg atacaagaat tttttacagg gcagaatctt tcttactcag
aagaaccaat
caccgaaatt cctggaacca aagtatttaa gagttcttcg gggaacattt
cattgtactg
ttgcagtatt tttgatcttc ccaggacaaa tattggcaaa tttgacatga
tttgggatag
aggagcatta gttgccatca atccaggtga tcgcaaatgc tatgcagata
caatgttttc
cctcctggga aagaagtttc agtatctcct gtgtgttctt tcttatgaac
caactaaaca
tccaggtcca ccattttatg ttccacatgc tgaaattgaa aggttgtttg
gtaaaatatg
caatatacgt tgtcttgaga aggttgatgc ttttgaagaa cgacataaaa
Maggie
gcgggcggag gcggggcgcg gagaagtggc
ggaggtggaa gcggaggcgt acccgcccct
ggggacgtca ttggtggcgg
aggcaatggc cggcaaccag ctgtaagcga ggcacggaag
acatatgctt
gtgagacaaa ggtgtctctg aaactatgga tggtacaaga acttcacttg
acattgaaga
gtactcggat actgaggtac agaaaaacca agtactaact ctggaagaat
ggcaagacaa
gtgggtgaac ggcaagactg cttttcatca ggaacaagga catcagctat
taaagaagca tttagatact
ttccttaaag gcaagagtgg actgagggta ttttttcctc
tttgcggaaa
agcggttgag atgaaatggt ttgcagaccg gggacacagt gtagttggtg
tggaaatcag
tgaacttggg atacaagaat tttttacaga gcagaatctt tcttactcag
aagaaccaat
caccgaaatt cctggaacca aagtatttaa gagttcttcg gggaacattt
cattgtactg
ttgcagtatt tttgatcttc ccaggacaaa tattggcaaa tttgacatga
tttgggatag
aggagcatta gttgccatca atccaggtga tcgcaaatgc tatgcagata
caatgttttc
cctcctggga aagaagtttc agtatctcct gtgtgttctt tcttatgagc
caactaaaca
tccaggtcca ccattttatg ttccacatgc tgaaattgaa aggttgtttg
gtaaaatatg
caatatacgt tgtcttgaga aggttgatgc ttttgaagaa cgacataaaa
Jada
gcgggcggag gcggggcgcg gagaagtggc
ggaggtggaa gcggaggcgt acccgcccct
ggggacgtca
ttggtggcgg aggcaatggc cggcaaccag ctgtaagcga ggcacggaag
acatatgctt
gtgagacaaa ggtgtctctg aaactatgga tggtacaaga acttcacttg
acattgaaga
gtactcggat actgaggtac agaaaaacca agtactaact ctggaagaat
ggcaagacaa
gtgggtgaac ggcaagactg cttttcatca ggaacaagga catcagctat
taaagaagca
tttagatact ttccttaaag gcaagagtgg actgagggta ttttttcctc
tttgcggaaa
agcggttgag atgaaatggt ttgcagaccg gggacacagt gtagttggtg
tggaaatcag
tgaacttggg atacaagaat tttttacagg gcagaatctt tcttactcag
aagaaccaat
caccgaaatt cctggaacca aagtatttaa gagttcttcg gggaacattt
cattgtactg
ttgcagtatt tttgatcttc ccaggacaaa tattggcaaa tttgacatga
tttgggatag
aggagcatta gttgccatca atccaggtga tcgcaaatgc tatgcagata
caatgttttc
cctcctggga aagaagtttc agtatctcct gtgtgttctt tcttatgagc
caactaaaca
tccaggtcca ccattttatg ttccacatgc tgaaattgaa aggttgtttg
gtaaaatatg
caatatacgt tgtcttgaga aggttgatgc ttttgaagaa cgacataaaa
Su
gcgggcggag gcggggcgcg gagaagtggc
ggaggtggaa gcggaggcgt acccgcccct
ggggacgtca
ttggtggcgg aggcaatggc cggcaaccag ctgtaagcga ggcacggaag
acatatgctt
gtgagacaaa ggtgtctctg aaactatgga tggtacaaga acttcacttg
acattgaaga
gtactcggat actgaggtac agaaaaacca agtactaact ctggaagaat
ggcaagacaa
gtgggtgaac ggcaagactg cttttcatca ggaacaagga catcagctat
taaagaagca
tttagatact ttccttaaag gcaagagtgg actgagggta ttttttcctc
tttgcggaaa
agcggttgag atgaaatggt ttgcagaccg gggacacagt gtagttggtg
tggaaatcag
tgaacttggg atacaagaat tttttacaga gcagaatctt tcttactcag
aagaaccaat
caccgaaatt cctggaacca aagtatttaa gagttcttcg gggaacattt
cattgtactg
ttgcagtatt tttgatcttc ccaggacaaa tattggcaaa tttgacatga
tttgggatag
aggagcatta gttgccatca atccaggtga tcgcaaatgc tatgcagata
caatgttttc
cctcctggga aagaagtttc agtatctcct gtgtgttctt tcttatgaac
caactaaaca
tccaggtcca ccattttatg ttccacatgc tgaaattgaa aggttgtttg
gtaaaatatg
caatatacgt tgtcttgaga aggttgatgc ttttgaagaa cgacataaaa
Nell
gcgggcggag gcggggcgcg gagaagtggc ggaggtggaa gcggaggcgt acccgcccct
ggggacgtca ttggtggcgg aggcaatggc cggcaaccag ctgtaagcga ggcacggaag
acatatgctt gtgagacaaa ggtgtctctg aaactatgga tggtacaaga acttcacttg
acattgaaga gtactcggat actgaggtac agaaaaacca agtactaact ctggaagaat
ggcaagacaa gtgggtgaac ggcaagactg cttttcatca ggaacaagga catcagctat
taaagaagca tttagatact ttccttaaag gcaagagtgg actgagggta ttttttcctc
tttgcggaaa agcggttgag atgaaatggt ttgcagaccg gggacacagt gtagttggtg
tggaaatcag tgaacttggg atacaagaat tttttacaga gcagaatctt tcttactcag
aagaaccaat caccgaaatt cctggaacca aagtatttaa gagttcttcg gggaacattt
cattgtactg ttgcagtatt tttgatcttc ccaggacaaa tattggcaaa tttgacatga
tttgggatag aggagcatta gttgccatca atccaggtga tcgcaaatgc tatgcagata
caatgttttc cctcctggga aagaagtttc agtatctcct gtgtgttctt tcttatgaac
caactaaaca tccaggtcca ccattttatg ttccacatgc tgaaattgaa aggttgtttg
gtaaaatatg caatatacgt tgtcttgaga aggttgatgc ttttgaagaa cgacataaaa
gcgggcggag gcggggcgcg gagaagtggc ggaggtggaa gcggaggcgt acccgcccct
ggggacgtca ttggtggcgg aggcaatggc cggcaaccag ctgtaagcga ggcacggaag
acatatgctt gtgagacaaa ggtgtctctg aaactatgga tggtacaaga acttcacttg
acattgaaga gtactcggat actgaggtac agaaaaacca agtactaact ctggaagaat
ggcaagacaa gtgggtgaac ggcaagactg cttttcatca ggaacaagga catcagctat
taaagaagca tttagatact ttccttaaag gcaagagtgg actgagggta ttttttcctc
tttgcggaaa agcggttgag atgaaatggt ttgcagaccg gggacacagt gtagttggtg
tggaaatcag tgaacttggg atacaagaat tttttacaga gcagaatctt tcttactcag
aagaaccaat caccgaaatt cctggaacca aagtatttaa gagttcttcg gggaacattt
cattgtactg ttgcagtatt tttgatcttc ccaggacaaa tattggcaaa tttgacatga
tttgggatag aggagcatta gttgccatca atccaggtga tcgcaaatgc tatgcagata
caatgttttc cctcctggga aagaagtttc agtatctcct gtgtgttctt tcttatgaac
caactaaaca tccaggtcca ccattttatg ttccacatgc tgaaattgaa aggttgtttg
gtaaaatatg caatatacgt tgtcttgaga aggttgatgc ttttgaagaa cgacataaaa